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USPTO Patent Application: HRD Cancer Classification and Treatment

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Published August 29th, 2023
Detected March 23rd, 2026
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Summary

The USPTO has published a patent application from Foundation Medicine, Inc. detailing systems and methods for classifying and treating homologous repair deficiency (HRD) cancers. The application describes models for identifying HRD-positive tumors and suggests combination therapies, such as FOLFIRINOX, for treatment.

What changed

This document is a USPTO patent application (US20260080973A1) filed by Foundation Medicine, Inc. It describes methods, devices, and systems for classifying tumors as HRD positive or negative, particularly for cancers like pancreatic cancer. The application also outlines treatment methods for HRD-positive cancers, suggesting sensitivity to combination therapies including fluorouracil and platinum-based agents like oxaliplatin (e.g., FOLFIRINOX).

As this is a patent application, it does not impose immediate regulatory obligations. However, it signals potential future developments in diagnostic tools and therapeutic approaches for HRD cancers. Companies involved in oncology drug development, diagnostics, and treatment may find the described methodologies and therapeutic combinations of interest for research and development purposes.

Source document (simplified)

← USPTO Patent Applications

SYSTEMS AND METHODS FOR CLASSIFYING AND TREATING HOMOLOGOUS REPAIR DEFICIENCY CANCERS

Application US20260080973A1 Kind: A1 Mar 19, 2026

Assignee

Foundation Medicine, Inc.

Inventors

Ethan SOKOL, Kuei-Ting CHEN, Russell MADISON

Abstract

Described herein are methods, devices, and systems for identifying a subset of a plurality of features, using one or more feature importance metrics, for training and using a homologous repair deficiency (HRD) classification model. Further described are methods, devices, and systems for classifying a tumor of a cancer, such as pancreatic cancer, as likely HRD positive or likely HRD negative, and for calling the tumor as HRD positive or HRD negative. Also described herein are methods of treating a tumor of a cancer, such as pancreatic cancer, based on the classifications. The cancer identified as HRD-positive may be particularly sensitive to a combination therapy comprising fluorouracil and a platinum-based chemotherapeutic agent (e.g., oxaliplatin), for example FOLFIRINOX.

CPC Classifications

G16B 20/00 A61K 31/4745 A61K 31/513 A61K 31/519 A61K 31/555 A61K 45/06 A61P 35/00 C12Q 1/68 G16B 40/20 G16H 10/40 G16H 10/60 G16H 50/30

Filing Date

2023-08-29

Application No.

19106985

View original document →

Named provisions

SYSTEMS AND METHODS FOR CLASSIFYING AND TREATING HOMOLOGOUS REPAIR DEFICIENCY CANCERS

Classification

Agency
USPTO
Published
August 29th, 2023
Instrument
Notice
Legal weight
Non-binding
Stage
Draft
Change scope
Minor
Document ID
US20260080973A1

Who this affects

Applies to
Drug manufacturers Pharmaceutical companies Healthcare providers
Industry sector
3254 Pharmaceutical Manufacturing 3345 Medical Device Manufacturing 6211 Healthcare Providers
Activity scope
Cancer Diagnosis Cancer Treatment
Geographic scope
United States US

Taxonomy

Primary area
Healthcare
Operational domain
R&D
Compliance frameworks
FDA 21 CFR Part 11 GxP
Topics
Biotechnology Pharmaceuticals

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